okay mystery man...Im guessing you're at the whole cut scene thing where Kyogre and Groudon are bashing the crud out of each other right?Well what you should do is go to the entrance to sootopolis city,not inside the perimeter but outside before you dived to get in.Then surf(ull have to work you're way around by exploring sorry!I just started a new game and Im not quite far enough to be there yet so sorry,but like I said surf down to the right as far as you can go then turn and go all the way left until you reach a weird clumping of rocks to the north of you(if you reach Pacifidlogyou've gone too far...but not by much!)and weave youre way through them until you find a patch of sand with a big tower like thing and The gym leader(I think) of Sootopolis(it might also be Steven!)talk to him and he flys away.Then ascend the tower find your good ole homie Rayquaza walk up to him,and cut scene with him flying off.From the top of the tower fly to sootopolis see cut-scene(wont spoil it for you!)then after scene over talk to team Aqua and Team Magma leaders,then go back to Sky Pillar before you battle gym leader(bring LOTS of Ultra Balls and healing!and catch you're first legendary)
hope I helped...I think I anwsered your question a lil too well...bu OH well!
~Engel der Bosheit
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